Nature:对国家卫生系统中的罕见疾病患者进行全基因组测序

2020-06-25 MedSci原创 MedSci原创

至今为止,大多数罕见病患者还没有得到分子诊断,超过一半的此类疾病的病因变异和致病基因仍有待发现。

至今为止,大多数罕见病患者还没有得到分子诊断,超过一半的此类疾病的病因变异和致病基因仍有待发现。

最近,在国家卫生系统中,研究人员使用全基因组测序(WGS)以简化诊断,并发现编码和非编码区域的未知病因变异。

研究人员为13,037名参与者生成了WGS数据,其中9,802人患有罕见病,并为7,065名广泛表型的参与者中的1,138人提供了基因诊断。

研究人员确定了95个基因与罕见病之间的孟德尔关联,其中11个基因在2015年之后被发现,至少有79个基因已经被确认为病因。

通过生成英国生物库参与者的WGS数据,研究人员发现罕见的等位基因可以解释在红细胞数量性状的尾部的个体性质。

最后,研究人员确定了四个新的非编码变异,通过破坏ARPC1B,GATA1,LRBA和MPL的转录引起疾病。

因此,该研究表明,在常规医疗中可以使用WGS进行诊断和病因学发现,其具有协同作用。

 

原始出处:

Ernest Turro et al. Whole-genome sequencing of patients with rare diseases in a national health system. Nature (2020).

 

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    2020-06-27 syscxl
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Anat Rec (Hoboken):携带常见耳聋基因变异的先天性中耳畸形分析

耳聋基因变异在内耳畸形中具有关键的作用。然而,先天中耳畸形与常见耳聋基因(GJB2, SLC26A4和mtDNA)在永久性感觉神经性耳聋儿童患者中的关系仍旧不清楚。最近,有研究人员的研究表明3个常见耳聋基因的总的变异频率在中耳畸形组(21.2%, 41/193)和正常中耳和内耳组(21.0%, 116/553)比较中没有统计学意义(χ2=0.0061, p=0.940)。更多的是,GJB2和SLC

Modern Pathology:反极性乳头状肾细胞癌中鉴定了复发性KRAS突变

综合性的分子分析阐释了乳头状肾细胞肿瘤(PRCC)是一种异质性的实体瘤。反极性乳头状肾肿瘤(PRNRP)是PRCC的子集,具有自身的特征组织形态,比如低等级的核特征,倒置的核位置,嗜酸性的细胞质,以及懒惰的临床行为。最近,有研究人员通过比较1型PRCC(PRCC1)和2型PRCC(PRCC2)尝试确定了PRNRP的分子、临床病理、组织学混合免疫组化特征。研究共包括了30个PRNRP案例,23个PR

PLoS Genet:编码限制性羧基末端结构域的SLC12A2变异体能够引起人类遗传性听力损失

由于致病基因的遗传异质性,遗传性听力损失的诊断比较有挑战性。到目前为止,仍旧有一些遗传性听力损失相关基因需要鉴定。

Ann Neurol:GGPS1变异能够引起肌萎缩/听力损失/卵巢功能不全综合征

早发肌肉萎缩症与感音神经性耳聋和原发性卵巢功能不全的相关性最初在2名兄弟姐妹中鉴定,并随后在另外一些患者中有类似的发现,但迄今为止仍旧没有详细的描述。最近,有研究人员阐释了该现象的遗传和分子发病机制。

J Cell Biochem:CHK1功能性变异能够导致鼻咽癌风险增加

DNA损伤检查点能够预防与DNA损伤有关的细胞周期过程,并能保持基因组的稳定性,检查点激酶1(CHK1)在大量人类癌症的病因学中不能忽视,其中包括了鼻咽癌(NPC)。最近,有研究人员探讨了CHK1 rs492510在NPC中的遗传多样性。研究包括了684名NPC患者和823名无癌对照。研究人员使用逻辑回归模型评估了rs492510和NPC易感性的相关性,并利用RT-PCR分析了不同鼻咽癌组织中CH