长链非编码RNA(lncRNA)靶标数据库及预测软件汇总

2014-01-10 MedSci MedSci原创

国内外长链非编码RNA的研究刚刚兴起,但已有相当多数据库资源供大家参考。(1) ChIPBase: 提供长链非编码RNA的表达图谱和转录调控的全面鉴定和注释。整合了高通量的RNA-seq鉴定的lncRNA及其表达图谱和ChIP-Seq实验技术鉴定的转录因子结合位点。网站:http://deepbase.sysu.edu.cn/chipbase/ 更新:2012年11月(2)LNCipedia: 对

国内外长链非编码RNA的研究刚刚兴起,但已有相当多数据库资源供大家参考。(1) ChIPBase: 提供长链非编码RNA的表达图谱和转录调控的全面鉴定和注释。整合了高通量的RNA-seq鉴定的lncRNA及其表达图谱和ChIP-Seq实验技术鉴定的转录因子结合位点。网站:http://deepbase.sysu.edu.cn/chipbase/ 更新:2012年11月(2)LNCipedia: 对人类的长链非编码RNA的序列和结构全面的注释。网站:http://www.lncipedia.org 更新:2012年7月(3)lncRNABase: 提供miRNA调控长非编码RNA(lncRNA)、假基因(pseudogene)和环状RNA(circRNA)的互作信息和ceRNA调控网络。这些调控互作网络信息是基于高通量的CLIP-Seq实验数据。网站:http://starbase.sysu.edu.cn/mirLncRNA.php 更新: 2013年11月(4)lncRNAdb: 提供有生物学功能的长链非编码RNA的全面注释。这是长链非编码RNA研究领域的大牛John mattick

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    2016-07-18 ms8000001455677582

    好东西 可以收藏

    0

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    2015-07-03 nini012

    十分感谢,感觉很有用

    0

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    2014-10-08 d830384
  5. [GetPortalCommentsPageByObjectIdResponse(id=93362, encodeId=0b289336250, content=好东西 可以收藏, beContent=null, objectType=article, channel=null, level=null, likeNumber=119, replyNumber=0, topicName=null, topicId=null, topicList=[], attachment=null, authenticateStatus=null, createdAvatar=https://cdnapi.center.medsci.cn/medsci/head/2018/01/27/95f4a711ca3a2b27feb769b3e2e65d19.jpg, createdBy=5b6f1926113, createdName=ms8000001455677582, createdTime=Mon Jul 18 19:12:00 CST 2016, time=2016-07-18, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=30325, encodeId=9369303254e, content=十分感谢,感觉很有用, beContent=null, objectType=article, channel=null, level=null, likeNumber=197, replyNumber=0, topicName=null, topicId=null, topicList=[], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=18e91630863, createdName=nini012, createdTime=Fri Jul 03 21:38:00 CST 2015, time=2015-07-03, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=2005615, encodeId=720220056154f, content=<a href='/topic/show?id=6ff1525e13' target=_blank style='color:#2F92EE;'>#CRN#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=27, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=5257, encryptionId=6ff1525e13, topicName=CRN)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=35fc2500023, createdName=yanjie6253_56072842, createdTime=Tue Nov 04 18:57:00 CST 2014, time=2014-11-04, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1743416, encodeId=b5d51e43416ff, content=<a href='/topic/show?id=369199618db' target=_blank style='color:#2F92EE;'>#非编码#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=35, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=99618, encryptionId=369199618db, topicName=非编码)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=32d435134939, createdName=d830384, createdTime=Wed Oct 08 00:57:00 CST 2014, time=2014-10-08, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1301847, encodeId=9f73130184e67, content=<a href='/topic/show?id=b469109e41d' target=_blank style='color:#2F92EE;'>#lncRNA#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=46, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=10974, encryptionId=b469109e41d, topicName=lncRNA)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=2317301, createdName=xzw113, createdTime=Sun Jan 12 08:57:00 CST 2014, time=2014-01-12, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1352718, encodeId=b44d1352e1848, content=<a href='/topic/show?id=827d9996311' target=_blank style='color:#2F92EE;'>#靶标#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=26, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=99963, encryptionId=827d9996311, topicName=靶标)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=4c37265, createdName=zhaojie88, createdTime=Sun Jan 12 08:57:00 CST 2014, time=2014-01-12, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1485805, encodeId=5f45148580599, content=<a href='/topic/show?id=d0f29e089a9' target=_blank style='color:#2F92EE;'>#长链非编码RNA#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=24, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=97089, encryptionId=d0f29e089a9, topicName=长链非编码RNA)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=5df38055979, createdName=minhuang75_72521586, createdTime=Sun Jan 12 08:57:00 CST 2014, time=2014-01-12, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1584620, encodeId=3e8115846204a, content=<a href='/topic/show?id=83f5e9250e9' target=_blank style='color:#2F92EE;'>#编码#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=29, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=79250, encryptionId=83f5e9250e9, topicName=编码)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=b10a17056098, createdName=12498f6em12暂无昵称, createdTime=Sun Jan 12 08:57:00 CST 2014, time=2014-01-12, status=1, ipAttribution=)]
    2014-01-12 xzw113
  6. [GetPortalCommentsPageByObjectIdResponse(id=93362, encodeId=0b289336250, content=好东西 可以收藏, beContent=null, objectType=article, channel=null, level=null, likeNumber=119, replyNumber=0, topicName=null, topicId=null, topicList=[], attachment=null, authenticateStatus=null, createdAvatar=https://cdnapi.center.medsci.cn/medsci/head/2018/01/27/95f4a711ca3a2b27feb769b3e2e65d19.jpg, createdBy=5b6f1926113, createdName=ms8000001455677582, createdTime=Mon Jul 18 19:12:00 CST 2016, time=2016-07-18, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=30325, encodeId=9369303254e, content=十分感谢,感觉很有用, beContent=null, objectType=article, channel=null, level=null, likeNumber=197, replyNumber=0, topicName=null, topicId=null, topicList=[], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=18e91630863, createdName=nini012, createdTime=Fri Jul 03 21:38:00 CST 2015, time=2015-07-03, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=2005615, encodeId=720220056154f, content=<a href='/topic/show?id=6ff1525e13' target=_blank style='color:#2F92EE;'>#CRN#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=27, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=5257, encryptionId=6ff1525e13, topicName=CRN)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=35fc2500023, createdName=yanjie6253_56072842, createdTime=Tue Nov 04 18:57:00 CST 2014, time=2014-11-04, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1743416, encodeId=b5d51e43416ff, content=<a href='/topic/show?id=369199618db' target=_blank style='color:#2F92EE;'>#非编码#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=35, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=99618, encryptionId=369199618db, topicName=非编码)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=32d435134939, createdName=d830384, createdTime=Wed Oct 08 00:57:00 CST 2014, time=2014-10-08, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1301847, encodeId=9f73130184e67, content=<a href='/topic/show?id=b469109e41d' target=_blank style='color:#2F92EE;'>#lncRNA#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=46, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=10974, encryptionId=b469109e41d, topicName=lncRNA)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=2317301, createdName=xzw113, createdTime=Sun Jan 12 08:57:00 CST 2014, time=2014-01-12, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1352718, encodeId=b44d1352e1848, content=<a href='/topic/show?id=827d9996311' target=_blank style='color:#2F92EE;'>#靶标#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=26, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=99963, encryptionId=827d9996311, topicName=靶标)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=4c37265, createdName=zhaojie88, createdTime=Sun Jan 12 08:57:00 CST 2014, time=2014-01-12, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1485805, encodeId=5f45148580599, content=<a href='/topic/show?id=d0f29e089a9' target=_blank style='color:#2F92EE;'>#长链非编码RNA#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=24, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=97089, encryptionId=d0f29e089a9, topicName=长链非编码RNA)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=5df38055979, createdName=minhuang75_72521586, createdTime=Sun Jan 12 08:57:00 CST 2014, time=2014-01-12, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1584620, encodeId=3e8115846204a, content=<a href='/topic/show?id=83f5e9250e9' target=_blank style='color:#2F92EE;'>#编码#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=29, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=79250, encryptionId=83f5e9250e9, topicName=编码)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=b10a17056098, createdName=12498f6em12暂无昵称, createdTime=Sun Jan 12 08:57:00 CST 2014, time=2014-01-12, status=1, ipAttribution=)]
    2014-01-12 zhaojie88
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