筛选条件 共查询到448条结果
排序方式
Force Field Benchmark of Amino Acids. 3. Hydration with Scaled Lennard-Jones Interactions

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (7)

Classical protein force fields were reported with too weak protein-water interactions relative to protein-protein interactions, leading to more compac......

MSLDOCK: Multi-Swarm Optimization for Flexible Ligand Docking and Virtual Screening

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (3)

Autodock and its various variants are widely utilized docking approaches, which adopt optimization methods as search algorithms for flexible ligand do......

Prediction of the Liquid-Liquid Extraction Properties of Imidazolium-Based Ionic Liquids for the Extraction of Aromatics from Aliphatics

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (7)

Liquid-liquid extraction (LLE) is an important technique to separate aromatics from aliphatics since these compounds have very similar boiling points ......

De Novo Molecule Design Through the Molecular Generative Model Conditioned by 3D Information of Protein Binding Sites

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (7)

De novo molecule design through the molecular generative model has gained increasing attention in recent years. Here, a novel generative model was pro......

Pathway-Based Drug Repurposing with DPNetinfer: A Method to Predict Drug-Pathway Associations via Network-Based Approaches

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (5)

Identification of drug-pathway associations plays an important role in pathway-based drug repurposing. However, it is time-consuming and costly to unc......

Mutation-Induced Impacts on the Switch Transformations of the GDP- and GTP-Bound K-Ras: Insights from Multiple Replica Gaussian Accelerated Molecular Dynamics and Free Energy Analysis

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (4)

Mutations yield significant effect on the structural flexibility of two switch domains, SW1 and SW2, in K-Ras, which is considered as an important tar......

Structure-Based Discovery of Novel Nonpeptide Inhibitors Targeting SARS-CoV-2 M-pro

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (8)

The continual spread of novel coronavirus disease 2019 (COVID-19) is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), posing a ......

Mechanistic Insights into the P450 TIeB-Catalyzed Unusual Intramolecular C-N Bond Formation Involved in the Biosynthesis of Indolactam V

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (7)

Indolactam V, a known biosynthetic precursor of indolactam alkaloids, is the main pharmacophore of this family and exhibits potential protein kinase C......

Novel Potential Small Molecule-MiRNA-Cancer Associations Prediction Model Based on Fingerprint, Sequence, and Clinical Symptoms

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (5)

As an important biomarker in organisms, miRNA is closely related to various small molecules and diseases. Research on small molecule-miRNA-cancer asso......

Filling the Gap in Understanding the Mechanism of GABA(A)R and Propofol Using Computational Approaches

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (4)

gamma-Aminobutyric acid type-A receptors (GABA(A)Rs) play a critical role in neural transmission by mediating the inhibitory neural firing and are the......

A Multitask Approach to Learn Molecular Properties

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (8)

The endeavors to pursue a robust multitask model to resolve intertask correlations have lasted for many years. A multitask deep neural network, as the......

Mesoscopic Simulation for the Effect of Cross-Linking Reactions on the Drug Diffusion Properties in Microneedles

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (8)

The drug diffusion issue in microneedles is the focus of its medical application. It will not only affect the distribution of drugs in the needle body......

D3DistalMutation: a Database to Explore the Effect of Distal Mutations on Enzyme Activity

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (5)

Enzyme activity is affected by amino acid mutations, particularly mutations near the active site. Increasing evidence has shown that distal mutations ......

Homotropic Cooperativity of Midazolam Metabolism by Cytochrome P450 3A4: Insight from Computational Studies

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (5)

Human cytochrome P450 3A4 (CYP3A4) is responsible for the metabolism of similar to 50% clinically used drugs. Midazolam (MDZ) is a commonly used sedat......

Molecular Insights into the Recruiting Between UCP2 and DDX5/UBAP2L in the Metabolic Plasticity of Non-Small-Cell Lung Cancer

期刊: JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021; 61 (8)

Mitochondrial uncoupling protein 2 (UCP2) is distributed in tumor cells with a link to the support of systemic metabolic deregulation, and the downreg......

共448条页码: 1/30页15条/页