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Response to comment on "Superposition of waves or densities: Which is the nature of chemical resonance?"

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (19)

I reply to the comment by Weinhold and Glendening on the article (J. Comput. Chem. 2021, 42, 412). I provide further explanation and an additional num......

Two novel semiconducting B2CO monolayers with high carrier mobilities

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (28)

The design of new two-dimensional (2D) materials with moderate band gaps and high carrier mobility is an important aspiration for materials innovation......

Free energy change estimation: The Divide and Conquer MBAR method

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (17)

In the present study, the Divide and Conquer MBAR (DC-MBAR) method is proposed to predict the free energies based on the data sampled by multi-states ......

Accurate prediction of the properties of materials using the CAM-B3LYP density functional

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (21)

Density functionals with asymptotic corrections to the long-range potential provide entry-level methods for calculations on molecules that can sustain......

Solid-state quantum chemistry with Theta phi (ThetaPhi): Spin-liquids, superconductors, and magnetic superstructures made computationally available

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (21)

We present a standalone Theta phi (ThetaPhi) package capable to read the results of ab initio DFT/PAW quantum-chemical solid-state calculations proces......

Evolution of the linker in microhydrated hydrogen dinitrate anions: From H+ to H5O2+

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (21)

Hydrogen dinitrate anion, HNO3(NO3-), is a proton-bound dimer with a very strong hydrogen bond. By employing ab initio molecular dynamics (AIMD) metho......

Exploring the molecular basis of UG-rich RNA recognition by the human splicing factor TDP-43 using molecular dynamics simulation and free energy calculation

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (23)

Transactivation response element RNA/DNA-binding protein 43 (TDP-43) is involved in the regulation of alternative splicing of human neurodegenerative ......

Judicious design functionalized 3D-COF to enhance CO2 adsorption and separation

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (13)

The effects of functional groups (including -OH, -OCH3, -NH2, -CH2NH2, -COOH, -SO3H, -OCO(CH2)(2)COOH(-E-COOH), and -(CH2)(4)COOH(-c-COOH)) in 3D cova......

The competition and cooperativity of hydrogen/halogen bond and pi-hole bond involving the heteronuclear ethylene analogues

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (13)

The noncovalent interactions involving heteronuclear ethylene analogues H2C(sic)EH2 (E = Si, Ge and Sn) have been studied by the Moller-Plesset pertur......

Rational design of the nickel-borane complex for efficient hydrogenation of styrene

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (8)

The Ni-B complex 1(BCF) with a facilely accessible monophosphine ((PBu3)-Bu-t) unit was theoretically designed, which was found to be more active than......

Multipolar electrostatics for hairpin and pseudoknots in RNA: Improving the accuracy of force field potential energy function

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2021; 42 (11)

Molecular dynamics (MD) simulations that rely on force field methods has been widely used to explore the structure and function of RNAs. However, the ......

The enhanced extended phenomenological kinetics method to deal with timescale disparity problem among different reaction pathways

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2020; 41 (24)

Kinetic Monte Carlo method can provide valuable mechanistic insights for catalytic systems. Nonetheless, it suffers from the notorious problem of time......

TheENUFmethod-Ewald summation based onnonuniformfast Fourier transform: Implementation, parallelization, and application

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2020; 41 (27)

Computer simulations of model systems are widely used to explore striking phenomena in promising applications spanning from physics, chemistry, biolog......

Toward a less costly but accurate calculation of the CCSD(T)/CBS noncovalent interaction energy

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2020; 41 (13)

The popular method of calculating the noncovalent interaction energies at the coupled-cluster single-, double-, and perturbative triple-excitations [C......

Mechanistic details of metal-free cyclization reaction of organophosphorus oxide with alkynes mediated by 2,6-lutidine and Tf2O

期刊: JOURNAL OF COMPUTATIONAL CHEMISTRY, 2020; 41 (18)

Theoretical investigations have elucidated the mechanism of metal-free electrophilic phosphinative cyclization of alkynes reaction reported by Miura a......

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