Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing

Alonge, M; Lebeigle, L; Kirsche, M; Jenike, K; Ou, SJ; Aganezov, S; Wang, XA; Lippman, ZB; Schatz, MC; Soyk, S

Schatz, MC (通讯作者)，Johns Hopkins Univ, Dept Comp Sci, Baltimore, MD 21218 USA.;Soyk, S (通讯作者)，Univ Lausanne, Ctr Integrat Genom, CH-1015 Lausanne, Switzerland.;Schatz, MC (通讯作者)，Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA.;Schatz, MC (通讯作者)，Johns Hopkins Univ, Dept Biol, Baltimore, MD 21218 USA.

GENOME BIOLOGY, 2022; 23 (1):

Abstract

Advancing crop genomics requires efficient genetic systems enabled by high-quality personalized genome assemblies. Here, we introduce RagTag, a toolse......

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