Skmer: assembly-free and alignment-free sample identification using genome skims

Sarmashghi, S; Bohmann, K; Gilbert, MTP; Bafna, V; Mirarab, S

Mirarab, S (reprint author), Univ Calif San Diego, Dept Elect & Comp Engn, La Jolla, CA 92093 USA.; Bafna, V (reprint author), Univ Calif San Diego, Dept Comp Sci & Engn, La Jolla, CA 92093 USA.

GENOME BIOLOGY, 2019; 20 ():

Abstract

The ability to inexpensively describe taxonomic diversity is critical in this era of rapid climate and biodiversity changes. The recent genome-skimmin......

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