Cell Death Differ:单细胞RNA测序揭示原发性葡萄膜黑色素瘤的肿瘤内异质性

2021-01-22 xiaozeng MedSci原创

葡萄膜黑色素瘤是一种侵袭性和致命性的肿瘤,由脉络膜中的黑色素细胞形成。

葡萄膜黑色素瘤是一种侵袭性和致命性的肿瘤,由脉络膜中的黑色素细胞形成。只有1-3%的患者在诊断时有可检测的转移灶。由于患者的生存率与原发肿瘤的大小相关,因此快速的局部治疗显得尤为重要。



即使原发性肿瘤被成功治愈,但在2.4年的中位时间内,仍有50%的患者出现了明显的肝转移。目前并没有批准的葡萄膜黑色素瘤全身治疗方法,这也使得90%的患者在诊断出转移后的6个月内死亡。

 

在许多癌症中,肿瘤内异质性已被认为是肿瘤转移扩散的主要原因。然而,在葡萄膜黑色素瘤中,特定细胞亚群的存在、生物学功能及其对转移的贡献仍然未知。因此,评估肿瘤内异质性和不同转录状态特征,鉴定相应的生物标志物对于转移性疾病的预防尤为重要。



单细胞RNA-seq揭示预后不良的细胞亚群


该研究采用六种不同原发性葡萄膜黑色素瘤的单细胞RNA测序进行多尺度的分析,研究人员发现了基因组和转录组水平上的肿瘤内异质性。研究人员在样本子集中鉴定了不同的转录细胞状态和不同的肿瘤相关人群。

 

进一步的研究发现了一个基因调控网络,在该调控网络中,肿瘤的侵袭性和患者的不良预后状态部分是由转录因子HES6驱动的。人原发性葡萄膜黑色素瘤中的RNAscope分析也证实了HES6的异质性表达。鸡胚尿囊膜实验显示,敲除HES6削弱细胞增殖、迁移和转移,证明了HES6在葡萄膜黑色素瘤中的重要作用。



单细胞RNA-seq揭示肿瘤内异质性


综上,单细胞分析结果为原发性葡萄膜黑色素瘤异质性提供了前所未有的视角,也鉴定了原发性肿瘤中的转移细胞是真正的生物标记,并揭示了可驱动肿瘤生长和转移形成的可靶向模块。最重要的是,该研究结果表明,HES6是阻止葡萄膜黑色素瘤发生发展的有效靶标。

 

原始出处:


Pandiani, C., Strub, T., Nottet, N. et al. Single-cell RNA sequencing reveals intratumoral heterogeneity in primary uveal melanomas and identifies HES6 as a driver of the metastatic disease. Cell Death Differ (18 January 2021).

 

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    2021-11-04 isabellayj
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    2021-02-27 sunylz
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createdName=仁医06, createdTime=Wed Dec 22 00:28:30 CST 2021, time=2021-12-22, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1680709, encodeId=aae61680e0969, content=<a href='/topic/show?id=9e5c86e0712' target=_blank style='color:#2F92EE;'>#色素#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=29, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=86707, encryptionId=9e5c86e0712, topicName=色素)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=343027846633, createdName=sunylz, createdTime=Sat Feb 27 14:28:30 CST 2021, time=2021-02-27, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1962441, encodeId=3b7d19624412c, content=<a href='/topic/show?id=dbe6445416' target=_blank style='color:#2F92EE;'>#CEL#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=36, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=4454, encryptionId=dbe6445416, topicName=CEL)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=c3ff68, createdName=维他命, createdTime=Mon Jul 26 13:28:30 CST 2021, time=2021-07-26, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1872137, encodeId=d66c18e2137cb, content=<a href='/topic/show?id=fd764459a8' target=_blank style='color:#2F92EE;'>#Cell#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=40, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=4459, encryptionId=fd764459a8, topicName=Cell)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=524d95, createdName=zhaozhouchifen, createdTime=Thu Jan 28 17:28:30 CST 2021, time=2021-01-28, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1418926, encodeId=d1c214189266c, content=<a href='/topic/show?id=abde36296f5' target=_blank style='color:#2F92EE;'>#单细胞RNA测序#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=23, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=36296, encryptionId=abde36296f5, topicName=单细胞RNA测序)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=eda53444564, createdName=wetgdt, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1425951, encodeId=5005142595139, content=<a href='/topic/show?id=588988285e6' target=_blank style='color:#2F92EE;'>#葡萄膜黑色素瘤#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=0, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=88285, encryptionId=588988285e6, topicName=葡萄膜黑色素瘤)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=a4394020991, createdName=360611841, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1516824, encodeId=c91f1516824b5, content=<a href='/topic/show?id=eb451556289' target=_blank style='color:#2F92EE;'>#RNA测序#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=42, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=15562, encryptionId=eb451556289, topicName=RNA测序)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=3b3411016716, createdName=ms24272190615788285182, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1531717, encodeId=35301531e175f, content=<a href='/topic/show?id=770e5e9457' target=_blank style='color:#2F92EE;'>#Death#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=18, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=5794, encryptionId=770e5e9457, topicName=Death)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=32e312278742, createdName=cy0328, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1559043, encodeId=94d21559043a4, content=<a href='/topic/show?id=e27610332666' target=_blank style='color:#2F92EE;'>#黑色素#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=39, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=103326, encryptionId=e27610332666, topicName=黑色素)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=150614999302, createdName=cqlidoudou, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=)]
    2021-07-26 维他命
  5. [GetPortalCommentsPageByObjectIdResponse(id=1784244, encodeId=3ffe1e8424449, content=<a href='/topic/show?id=f01159527d' target=_blank style='color:#2F92EE;'>#Differ#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=36, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=5952, encryptionId=f01159527d, topicName=Differ)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=d784426, createdName=isabellayj, createdTime=Thu Nov 04 17:28:30 CST 2021, time=2021-11-04, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1846954, encodeId=50d51846954b8, content=<a href='/topic/show?id=d3a33e0306d' target=_blank style='color:#2F92EE;'>#原发性#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=41, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=37030, encryptionId=d3a33e0306d, topicName=原发性)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=55683, createdName=仁医06, createdTime=Wed Dec 22 00:28:30 CST 2021, time=2021-12-22, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1680709, encodeId=aae61680e0969, content=<a href='/topic/show?id=9e5c86e0712' target=_blank style='color:#2F92EE;'>#色素#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=29, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=86707, encryptionId=9e5c86e0712, topicName=色素)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=343027846633, createdName=sunylz, createdTime=Sat Feb 27 14:28:30 CST 2021, time=2021-02-27, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1962441, encodeId=3b7d19624412c, content=<a href='/topic/show?id=dbe6445416' target=_blank style='color:#2F92EE;'>#CEL#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=36, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=4454, encryptionId=dbe6445416, topicName=CEL)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=c3ff68, createdName=维他命, createdTime=Mon Jul 26 13:28:30 CST 2021, time=2021-07-26, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1872137, encodeId=d66c18e2137cb, content=<a href='/topic/show?id=fd764459a8' target=_blank style='color:#2F92EE;'>#Cell#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=40, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=4459, encryptionId=fd764459a8, topicName=Cell)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=524d95, createdName=zhaozhouchifen, createdTime=Thu Jan 28 17:28:30 CST 2021, time=2021-01-28, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1418926, encodeId=d1c214189266c, content=<a href='/topic/show?id=abde36296f5' target=_blank style='color:#2F92EE;'>#单细胞RNA测序#</a>, beContent=null, objectType=article, channel=null, 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href='/topic/show?id=eb451556289' target=_blank style='color:#2F92EE;'>#RNA测序#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=42, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=15562, encryptionId=eb451556289, topicName=RNA测序)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=3b3411016716, createdName=ms24272190615788285182, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1531717, encodeId=35301531e175f, content=<a href='/topic/show?id=770e5e9457' target=_blank style='color:#2F92EE;'>#Death#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=18, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=5794, encryptionId=770e5e9457, topicName=Death)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=32e312278742, createdName=cy0328, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1559043, encodeId=94d21559043a4, content=<a href='/topic/show?id=e27610332666' target=_blank style='color:#2F92EE;'>#黑色素#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=39, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=103326, encryptionId=e27610332666, topicName=黑色素)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=150614999302, createdName=cqlidoudou, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=)]
  6. [GetPortalCommentsPageByObjectIdResponse(id=1784244, encodeId=3ffe1e8424449, content=<a href='/topic/show?id=f01159527d' target=_blank style='color:#2F92EE;'>#Differ#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=36, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=5952, encryptionId=f01159527d, topicName=Differ)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=d784426, createdName=isabellayj, createdTime=Thu Nov 04 17:28:30 CST 2021, time=2021-11-04, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1846954, encodeId=50d51846954b8, content=<a href='/topic/show?id=d3a33e0306d' target=_blank style='color:#2F92EE;'>#原发性#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=41, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=37030, encryptionId=d3a33e0306d, topicName=原发性)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=55683, 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encryptionId=dbe6445416, topicName=CEL)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=c3ff68, createdName=维他命, createdTime=Mon Jul 26 13:28:30 CST 2021, time=2021-07-26, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1872137, encodeId=d66c18e2137cb, content=<a href='/topic/show?id=fd764459a8' target=_blank style='color:#2F92EE;'>#Cell#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=40, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=4459, encryptionId=fd764459a8, topicName=Cell)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=524d95, createdName=zhaozhouchifen, createdTime=Thu Jan 28 17:28:30 CST 2021, time=2021-01-28, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1418926, encodeId=d1c214189266c, content=<a href='/topic/show?id=abde36296f5' target=_blank style='color:#2F92EE;'>#单细胞RNA测序#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=23, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=36296, encryptionId=abde36296f5, topicName=单细胞RNA测序)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=eda53444564, createdName=wetgdt, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1425951, encodeId=5005142595139, content=<a href='/topic/show?id=588988285e6' target=_blank style='color:#2F92EE;'>#葡萄膜黑色素瘤#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=0, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=88285, encryptionId=588988285e6, topicName=葡萄膜黑色素瘤)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=a4394020991, createdName=360611841, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1516824, encodeId=c91f1516824b5, content=<a href='/topic/show?id=eb451556289' target=_blank style='color:#2F92EE;'>#RNA测序#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=42, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=15562, encryptionId=eb451556289, topicName=RNA测序)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=3b3411016716, createdName=ms24272190615788285182, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1531717, encodeId=35301531e175f, content=<a href='/topic/show?id=770e5e9457' target=_blank style='color:#2F92EE;'>#Death#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=18, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=5794, encryptionId=770e5e9457, topicName=Death)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=32e312278742, createdName=cy0328, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1559043, encodeId=94d21559043a4, content=<a href='/topic/show?id=e27610332666' target=_blank style='color:#2F92EE;'>#黑色素#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=39, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=103326, encryptionId=e27610332666, topicName=黑色素)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=150614999302, createdName=cqlidoudou, createdTime=Sun Jan 24 12:28:30 CST 2021, time=2021-01-24, status=1, ipAttribution=)]
  7. [GetPortalCommentsPageByObjectIdResponse(id=1784244, encodeId=3ffe1e8424449, content=<a href='/topic/show?id=f01159527d' target=_blank style='color:#2F92EE;'>#Differ#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=36, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=5952, encryptionId=f01159527d, topicName=Differ)], attachment=null, authenticateStatus=null, createdAvatar=, createdBy=d784426, createdName=isabellayj, createdTime=Thu Nov 04 17:28:30 CST 2021, time=2021-11-04, status=1, ipAttribution=), GetPortalCommentsPageByObjectIdResponse(id=1846954, encodeId=50d51846954b8, content=<a href='/topic/show?id=d3a33e0306d' target=_blank style='color:#2F92EE;'>#原发性#</a>, beContent=null, objectType=article, channel=null, level=null, likeNumber=41, replyNumber=0, topicName=null, topicId=null, topicList=[TopicDto(id=37030, encryptionId=d3a33e0306d, topicName=原发性)], attachment=null, authenticateStatus=null, createdAvatar=null, createdBy=55683, 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