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Epigenomic and transcriptomic analyses define core cell types, genes and targetable mechanisms for kidney disease

期刊: NATURE GENETICS, 2022; 54 (7)

More than 800 million people suffer from kidney disease, yet the mechanism of kidney dysfunction is poorly understood. In the present study, we define......

JIF:23.097

Substantial somatic genomic variation and selection for BCOR mutations in human induced pluripotent stem cells

期刊: NATURE GENETICS, 2022; 54 (9)

We explored human induced pluripotent stem cells (hiPSCs) derived from different tissues to gain insights into genomic integrity at single-nucleotide ......

JIF:23.097

Rare coding variation provides insight into the genetic architecture and phenotypic context of autism

期刊: NATURE GENETICS, 2022; 54 (9)

Some individuals with autism spectrum disorder (ASD) carry functional mutations rarely observed in the general population. We explored the genes disru......

JIF:23.097

Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data

期刊: NATURE GENETICS, 2022; 54 (10)

scDRS associates individual cells in scRNA-seq with disease by scoring single-cell transcriptomes using GWAS gene signatures. Applied to 74 GWAS and 1......

JIF:23.097

Genomic insights into TASK-1 reveal functional roles in sleep apnea

期刊: NATURE GENETICS, 2022; 54 (10)

KCNK3 mutations identified in sleep apnea probands affect TASK-1 X-gate function. These changes lead to an increase in potassium current and open prob......

JIF:23.097

Long-range phasing of dynamic, tissue-specific and allele-specific regulatory elements

期刊: NATURE GENETICS, 2022; 54 (10)

Epigenomic maps identify gene regulatory elements by their chromatin state. However, prevailing short-read sequencing methods cannot effectively disti......

JIF:23.097

Disrupted beta-cell-specific gene silencing causes congenital hyperinsulinism

期刊: NATURE GENETICS, 2022; 54 (11)

Genome sequencing and analysis of public epigenomic data enabled the identification of disease-causing variants in a non-coding regulatory region of h......

JIF:23.097

Analysis of rare genetic variation underlying cardiometabolic diseases and traits among 200,000 individuals in the UK Biobank

期刊: NATURE GENETICS, 2022; 54 (3)

Cardiometabolic diseases are the leading cause of death worldwide. Despite a known genetic component, our understanding of these diseases remains inco......

JIF:23.097

Global landscape of SARS-CoV-2 genomic surveillance and data sharing

期刊: NATURE GENETICS, 2022; 54 (4)

Genomic surveillance has shaped our understanding of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants. We performed a global land......

JIF:23.097

Breast tumor microenvironment structures are associated with genomic features and clinical outcome

期刊: NATURE GENETICS, 2022; 54 (5)

Imaging mass cytometry profiling of 693 breast tumors identified 10 recurrent tumor microenvironment spatial structures. These structures were enriche......

JIF:23.097

Genetic architecture of 11 major psychiatric disorders at biobehavioral, functional genomic and molecular genetic levels of analysis

期刊: NATURE GENETICS, 2022; 54 (5)

Joint analysis of 11 major psychiatric disorders identifies four broad factor underlying genetic correlations among the disorders. Association analyse......

JIF:23.097

Systematic characterization of gene function in the photosynthetic alga Chlamydomonas reinhardtii

期刊: NATURE GENETICS, 2022; 54 (5)

Most genes in photosynthetic organisms remain functionally uncharacterized. Here, using a barcoded mutant library of the model eukaryotic alga Chlamyd......

JIF:23.097

DeepSTARR predicts enhancer activity from DNA sequence and enables the de novo design of synthetic enhancers

期刊: NATURE GENETICS, 2022; 54 (5)

Enhancer sequences control gene expression and comprise binding sites (motifs) for different transcription factors (TFs). Despite extensive genetic an......

JIF:23.097

Dual function NFI factors control fetal hemoglobin silencing in adult erythroid cells

期刊: NATURE GENETICS, 2022; 54 (6)

The mechanisms by which the fetal-type beta-globin-like genes HBG1 and HBG2 are silenced in adult erythroid precursor cells remain a fundamental quest......

JIF:23.097

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