Ontology-aware deep learning enables ultrafast and interpretable source tracking among sub-million microbial community samples from hundreds of niches

Zha, YG; Chong, H; Qiu, H; Kang, K; Dun, Y; Chen, ZX; Cui, XF; Ning, K

Ning, K (通讯作者),Huazhong Univ Sci & Technol, Hubei Key Lab Bioinformat & Mol Imaging, Coll Life Sci & Technol,Minist Educ,Ctr AI Biol, Key Lab Mol Biophys,Dept Bioinformat & Syst Biol, Wuhan 430074, Hubei, Peoples R China.;Cui, XF (通讯作者),Shandong Univ, Sch Comp Sci & Technol, Qingdao 266237, Shandong, Peoples R China.

GENOME MEDICINE, 2022; 14 (1):

Abstract

The taxonomic structure of microbial community sample is highly habitat-specific, making source tracking possible, allowing identification of the nich......

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